Sorry Jessie, meant to ask where fskview places all the labels? Never
e-mail before your first coffee!
Dave Flitney, IT Manager
University of Oxford, FMRIB Centre
JR Hospital, Oxford OX3 9DU
T: 01865 222713 F: 01865 222717
On 4 Dec 2009, at 08:18, Dave Flitney <[log in to unmask]> wrote:
> Jessie,
>
> Just to comfirm the rest of the acquisition orientation: in fslview
> where does it place the A&P labels?
>
> Dave Flitney, IT Manager
> University of Oxford, FMRIB Centre
> JR Hospital, Oxford OX3 9DU
> T: 01865 222713 F: 01865 222717
>
> On 3 Dec 2009, at 19:47, Jessie Mathews <[log in to unmask]>
> wrote:
>
>> Dear FSL Experts,
>>
>> Our data is currently in neurological orientation, as confirmed by
>> a Vitamin E capsule (we
>> placed the Vit. E pill on the left side of the head and fslview
>> shows the pill on the left side
>> of the screen).
>>
>> Using fslorient -getorient, however, fsl thinks that our data is in
>> radiological orientation.
>> Additionally, the labels in fslview show the opposite from what
>> they should - the left side is
>> labelled as right.
>>
>> How does this effect my interpretation of data? Can I simply just
>> swap left for right in my
>> results? For example, switch positive x coordinates with negative
>> ones? Or are my results
>> uninterpretable as is. Please let me know if there is a solution
>> for this.
>>
>> Thank you in advance.
>>
>
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