Hi
You can use the following command (note where the atlas data is):
f=$FSLDIR/data/atlases/HarvardOxford/HarvardOxford-cort-maxprob-
thr25-2mm
fslmaths $f -thr 48 -uthr 48 myroi
Cheers,
Saad.
On 4 Dec 2009, at 03:01, Kenji wrote:
> Hello,
>
> I would like to create ROI which has only 48 label(intensity) using
> Harvard-Oxford atlas.
> Is this possible in command(fslmaths etc), not drawing the ROI in
> fslview?
>
> I would be very grateful for any suggestions.
> Many thanks.
> -Kenji
>
> <atlas.png>
--
Saad Jbabdi
University of Oxford, FMRIB Centre
JR Hospital, Headington, OX3 9DU, UK
+44 (0) 1865 222466 (fax 717)
www.fmrib.ox.ac.uk/~saad
|