Dear FSL Experts,
Our data is currently in neurological orientation, as confirmed by a Vitamin E capsule (we
placed the Vit. E pill on the left side of the head and fslview shows the pill on the left side
of the screen).
Using fslorient -getorient, however, fsl thinks that our data is in radiological orientation.
Additionally, the labels in fslview show the opposite from what they should - the left side is
labelled as right.
How does this effect my interpretation of data? Can I simply just swap left for right in my
results? For example, switch positive x coordinates with negative ones? Or are my results
uninterpretable as is. Please let me know if there is a solution for this.
Thank you in advance.
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