Hi,
There was an error in the documentation which caused the
volumetric instructions to be commented out. I have now
restored the correct instructions, so please look at:
http://www.fmrib.ox.ac.uk/fsl/first/index.html
under the "Volumetric Analysis" heading.
All the best,
Mark
On 7 Nov 2009, at 05:51, SUBSCRIBE FSL hankee wrote:
> Hi,
> I am very sorry to interrupt you again.
> Now I want to calculate the volume of subcortical structure, such as
> thalamus, hippocampus and so on and do some perform volumetric
> analysis. So
> I read the the FIRST website again. In the website instruction, we
> should do
> boundary correction firstly and then do fslstats. But when I read the
> first_boundary_corr command instruction, it said that this command
> has been
> run in run_first_all procedure. But I don't found any output files of
> first_boundary_corr command in directory. So I don't know how to get
> the
> volume of subcortical structure,such as thalamus, hippocampus and so
> on.
> Can you give me some detail procedure to get the subcortical structure
> volume?
> Thank you very much!!!
>
> yours sincerely,
> Hankee
>
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