A quick follow-up: it is not clear to me that the program is really
able to deal with pseudo-2D data (as opposed to pseudo-3D, I guess).
It fails to generate a functional window to display the data, with the
following error:
Spectrum successfully opened
Exception in Tkinter callback
Traceback (most recent call last):
File "ccpnmr/python2.5/lib/python2.5/lib-tk/Tkinter.py", line 1403,
in __call__
return self.func(*args)
File "ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/
OpenSpectrum.py", line 379, in openSpectra
File "/opt/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/Analysis.py",
line 1243, in finishInitSpectrum
self.checkCreateSpectrumViews(spectrum)
File "/opt/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/Analysis.py",
line 1375, in checkCreateSpectrumViews
spectrum=spectrum)
File "ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/WindowBasic.py",
line 663, in createSpectrumWindow
AttributeError: 'NoneType' object has no attribute 'name'
This dataset contains a series of 1H 1Ds, with differing mixing times
in the '2nd' dimension. So I chose the H[T1(H1)] exp type which seemed
the closest to what I wanted.
It seems like Analysis is just not sure how to deal with these kinds
of data...
Patrick
On Nov 20, 2009, at 12:48 PM, Patrick van der Wel wrote:
> Hi,
>
> I am not sure if there has been any follow up on this, but I could
> not find
> any. I just ran into the same issue, using some Bruker pseudo-2D
> data. It
> nicely pops up a window to enter the values, but for some reason
> defaults to
> the wrong number of entry boxes. And I also find that it does know the
> proper number required since it gives you an error if you get it
> wrong.
>
> Patrick
>
> On Mon, 9 Feb 2009 17:37:06 +0000, Wayne Boucher <[log in to unmask]
> >
> wrote:
>
>> Hmm, this definitely sounds like it could be improved. Is this for
>> NmrPipe or for Bruker pseudo-3D data (well, it might be a problem for
>> both!)? (Just so I can see if I have some data I can try this out
>> on.)
>> (So for Azara pseduo-3D data it should do it all automatically.)
>>
>> Wayne
>>
>> On Mon, 9 Feb 2009, Mark Pfuhl wrote:
>>
>>> When I load a pseudo 3D spectrum a window pops up asking me for
>>> the point
>>> values, fair enough. But why does this window not have the correct
>>> number of
>>> entries, i.e. why do I have provide the correct number of fields?
>>> When I
>>> click on OK before the correct number is present I get an error
>>> message
>>> where it tells me how many points there are. Would it be possible
>>> to simple
>>> read out that value right at the start and generate an input
>>> template with
>>> the correct number of fields?
>>> If that is not possible : would it be possible to move the '+' and
>>> '-'
>>> buttons above the list? At the moment not only do I have to keep
>>> clicking a
>>> lot but I also have to move the mouse after each click because the
>>> list gets
>>> longer and moves the buttons.
>>> thanks,
>>> mark
>>>
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