Hi Gwenaelle
OK fantastic. Have it all working now and have created some very nice images
- thanks very much for your help.
Regards
Mark
On 22/10/09 1:00 AM, "Gwenaëlle DOUAUD" <[log in to unmask]> wrote:
> Hi Mark,
no, you've got it right, you need to upsample your VBM results or
> downsample your TBSS ones:
flirt -in myvbm_results_2mm -ref MNI_1mm -out
> myvbm_results_1mm -init ID.mat -applyisoxfm 1
Cheers,
Gwenaelle
(ID.mat:
1 0
> 0 0
0 1 0 0
0 0 1 0
0 0 0 1)
--- En date de : Mer 21.10.09, Mark Walterfang
> <[log in to unmask]> a écrit :
> De: Mark Walterfang
> <[log in to unmask]>
> Objet: [FSL] Displaying TBSS & FSL-VBM results
> on the same template
> À: [log in to unmask]
> Date: Mercredi 21 Octobre 2009,
> 0h47
> Hi all
>
> I've not seen this on the list before and couldn't locate
>
> anything on the
> JISCMAIL archive. I've conducted TBSS and FSL-VBM on the
>
> same individuals,
> and am interested in finding a way to overlay the FA
>
> results and grey matter
> VBM results on the same template. I know the MNI
> templates
> are 1 and 2mm,
> and I can't display one image of one dimension on
> a
> template of another
> dimension. Is FLIRT what I would need to use to
> resample
> one set of results
> into the same space as the other? Or am I
> un-necessarily
> complicating
> things, and missing a more obvious and simple
> solution?
>
> Regards
>
> Mark Walterfang
>
WARNING: This message
> originated from outside the Northern/Melbourne/Western Health e-mail network.
> The sender cannot be validated. Caution is advised. Contact IT Services (+61 3
> ) 9342 8888 for more information.
|