Are you running SGE on your machines? Does it work properly with other FSL
scripts? If not, FSL is supposed to detect that SGE is not present and not
try to submit jobs to an SGE queue (i.e. short.q in your error message).
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of Ankit Master
Sent: Wednesday, October 07, 2009 11:25 PM
To: [log in to unmask]
Subject: [FSL] Problems running tbss_2_reg
Hello,
I am having issues using tbss_2_reg.
I am trying to use FMRIB58_FA standard-space image as the target and
following is what I am typing at the command line
tbss_2_reg -T
and everytime when I try to run this from a folder which has two subfolders
FA and orig, I end up getting an error. I am not sure if I am suppose to
specify the input files !!
following is the error msg that I encounter.
dti_vol_1_2_FA_FA_to_target
dti_vol_1_FA_FA_to_target
Unable to run job: Job was rejected because job requests unknown queue
"short.q".
Any help will be greatly appreciated.
Thank you in advance
Sincerely,
Ankit Master
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