Hi,
As others have pointed out, fsl2ascii does exactly what
is needed here! :)
All the best,
Mark
On 14 Oct 2009, at 07:57, Rolf Heckemann wrote:
> Ying
>
> As far as I'm aware, you cannot convert NIfTI to ASCII with FSL, but
> an external utility will do it. Try (X)MedCon
> <http://xmedcon.sourceforge.net/>
>
> Rolf
>
>
> On Tue, Oct 13, 2009 at 10:36:21PM +0100, Ying Chen wrote:
>> Hello,
>>
>> Bet2 -m option generates binary brain mask, with 0 outside the
>> brain and 1
>> inside the brain. The output brain mask is in .nii.gz format. My
>> questions
>> is how I can read it as a text file which has a bunch of zeros and
>> ones. Do
>> I need to convert .nii.gz format to another kind of format to be
>> able to
>> read the text version of the brain mask?
>>
>> Thanks a lot in advance,
>> Ying
>
> --
> Rolf A Heckemann, MD PhD
> Médecin chercheur
> Fondation Neurodis
> CERMEP - Imagerie du Vivant
> Hôpital Neurologique Pierre Wertheimer
> 59 Boulevard Pinel
> 69003 Lyon
> France
>
>
> 1255503279
>
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