In unix (linux or bsd are the choice unices nowadays):
grep -v ANISOU my_file.pdb > my_new_file.pdb
HTH,
Fred.
Raja Dey wrote:
> Hello,
> I remember PDBCUR was running before updating CCP4 to 6.1.1 in
> my macbook. I am trying to remove the aniso U's from a pdb file and I
> stuck. I might need some additional setup for this to run. Is there
> anyone who can tell what to do? I attached the error message below:
>
> ###############################################################
> ###############################################################
> ###############################################################
> ### CCP PROGRAM SUITE: pdbcur ##########
> ###############################################################
> User: Run date: Run time:
>
>
> Please reference: Collaborative Computational Project, Number 4. 1994.
> The CCP4 Suite: Programs for Protein Crystallography. Acta Cryst.
> D50, 760-763.
> as well as any specific reference in the program write-up.
>
> PDB file
> /Users/rajadey/yong/cns/alternate/final/phenix/may21_1_1_001.pdb has
> been read in.
>
> ------------------------------------------------------------------------------
> Input cards
>
> Data line--- NOANISOU
> Unrecognised keyword "NOANISOU"
> ***************************************************************************
> * Information from CCP4Interface script
> ***************************************************************************
> The program run with command: pdbcur XYZIN
> "/Users/rajadey/yong/cns/alternate/final/phenix/may21_1_1_001.pdb"
> XYZOUT "/Users/rajadey/yong/cns/alternate/final/phenix/may21_pdbset1.pdb"
> has failed with error message
> child process exited abnormally
> ************************************************
>
> Thanks...
>
> Raja
>
>
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