Eleanor,
I downloaded again ccp4-4.2.2_Linux.tar.gz and re-installed truncate. It
worked this time. Perhaps the file got corrupted during ftp transfer?
Anyway, thanks for your help.
All the best,
Fred.
Eleanor Dodson wrote:
> I dont understand it - it works for me..
>
> Here is the log file - I guess it is a later version of truncate?
>
> Vellieux Frederic wrote:
>> Dear Eleanor,
>>
>> Thanks for taking a look at the data. The mtz file is still v4.2.2
>> (my own programs read that library and I only convert to the latest
>> MTZ definition once I have used my software --- I have no time to
>> keep up with the constantly changing MTZ format and to adapt my own
>> software to this new format --- I only have 2 hands and they are very
>> busy at the moment).
>>
>> The data are nothing mysterious: lysozyme tetragonal form, I am still
>> teaching this practical course I used to teach at the Royal
>> University of Groningen 1985-1987 but we go a little further than the
>> precession photographs we were taking at the time. You will note that
>> the space group is P41212, this is done on purpose, doing as if we
>> were solving the 3D structure de novo and thus not knowing the space
>> group.
>>
>> All the best, and regards to Guy.
>>
>> Fred.
>>
>> Eleanor Dodson wrote:
>>> Can you send data and script - I will delete it asap I PROMISE!
>>> E
>>>
>>> Vellieux Frederic wrote:
>>>> Well, I did try this data manipulation with sftools and truncate
>>>> still chokes. Any suggestions are welcome. Thanks in advance,
>>>>
>>>> Fred.
>>>>
>>>> Vellieux Frederic wrote:
>>>>> Dear Eleanor,
>>>>>
>>>>> Hope all is well with you (and with Guy).
>>>>>
>>>>> We haven't touched the atomsf.lib file. It is the same in all
>>>>> versions of ccp4 we have lying around here. Will go on looking for
>>>>> a solution (perhaps the problem lies with the fact that the input
>>>>> MTZ file already contains columns for FP and SIGFP, that have not
>>>>> been properly scaled --- I'll try to remove those columns with
>>>>> sftools and see if truncate still chokes).
>>>>>
>>>>> Thanks for your advice.
>>>>>
>>>>> And wish you a nice afternoon,
>>>>>
>>>>> Fred.
>>>>>
>>>
>>>
>>>
>>
>
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