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STARDEV  September 2009

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Subject:

Bug in Kappa's mfittrend.

From:

Jamie Leech <[log in to unmask]>

Reply-To:

Starlink development <[log in to unmask]>

Date:

Wed, 23 Sep 2009 15:14:33 +0100

Content-Type:

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TEXT/PLAIN (128 lines)

Hi,


  I think I've found a bug in mfittrend in the version of kappa
  (1.9-11) which was part of the lehuakona starlink release. It seems
  that straight line fitting can give very wrong fits for certain map
  regions in this release but works in the previous humu and, interestingly
  the latest nanahope release. Details for reproduction are below.


  This bug could potentially have serious repercussions for any NGLS
  data reduced in the 9 month time period where lehuakona was the main
  release. mfittrend is used multiple times in standard reductions and
  we only happened to notice it when I tried rerunning a script on a
  machine with lehuakona on it and found the final map to be
  different from that generated on a humu machine.

  I do not know if there is any platform dependence - the test machine
  for the buggy lehuakona results was an Ubuntu Linux Hardy Heron machine.

  Regards,

  Jamie and Boon.


######################################################################

You can find the input .sdf file for the following here:

http://www-astro.physics.ox.ac.uk/~jxl/B_smooth.sdf


Input file : B_smooth.sdf

run:

mfittrend in=B_smooth axis=3 order=1 out=temp_02 auto mask=temp_mask2 
method=global variance=false subtract=false 'clip=[1.5,2.5,2,3,5]'


then do:

stats temp_02


On humu  (KAPPA version 1.8-9)
-------------------------------

  Pixel statistics for the NDF structure
/Volumes/Users/tanb/My_Data/2009/Research_2009/zzz_ongoing/NGC/NGC3351_rework_t
est/temp_02

       Title                     : <undefined>
       NDF array analysed        : DATA

          Pixel sum              : 727002
          Pixel mean             : 0.332604
          Standard deviation     : 0.558958
          Minimum pixel value    : -1.27967
             At pixel            : (-3, 11, 951)
             Co-ordinate         : (10:44:00.8, 11:43:21, 1189.861)
          Maximum pixel value    : 1.57673
             At pixel            : (4, -4, 951)
             Co-ordinate         : (10:43:55.8, 11:41:46, 1189.861)
          Total number of pixels : 2185792
          Number of pixels used  : 2185792 (100.0%)


On lehuakona get  (KAPPA version 1.9-11)
----------------------------------------

    Pixel statistics for the NDF structure /home/jxl/temp/test_area/temp_02

       Title                     : <undefined>
       NDF array analysed        : DATA

          Pixel sum              : 1.31314e+06
          Pixel mean             : 0.600759
          Standard deviation     : 1.99485
          Minimum pixel value    : -16.4671
             At pixel            : (0, 12, -952)
             Co-ordinate         : (10:43:59.5, 11:43:33, 379.9976)
          Maximum pixel value    : 29.2387
             At pixel            : (-4, 9, -952)
             Co-ordinate         : (10:44:01.1, 11:43:05, 379.9976)
          Total number of pixels : 2185792
          Number of pixels used  : 2185792 (100.0%)


On Nanahope (Kappa version 1.10-10)
-----------------------------------

aslx2:~/temp/test_area_nanahope> stats temp_02.sdf

    Pixel statistics for the NDF structure
/home/jxl/temp/test_area_nanahope/temp_02

       Title                     : <undefined>
       NDF array analysed        : DATA

          Pixel sum              : 727002
          Pixel mean             : 0.332604
          Standard deviation     : 0.558958
          Minimum pixel value    : -1.27967
             At pixel            : (-3, 11, 951)
             Co-ordinate         : (10:44:00.8, 11:43:21, 1189.861)
          Maximum pixel value    : 1.57673
             At pixel            : (4, -4, 951)
             Co-ordinate         : (10:43:55.8, 11:41:46, 1189.861)
          Total number of pixels : 2185792
          Number of pixels used  : 2185792 (100.0%)

########################################


If you use GAIA to look at the output file (temp_02.sdf), which is the linear 
baseline fits for the B_smooth map, it is clear that the lehuakona version has 
problems -- it looks as though in certain regions the fitted line is not a good 
approximation to the data in the same region of the B_smooth map. It seems as 
though the magnitude is much larger than it should be in these regions. 
Interestingly these regions correspond to the maximal positive and minimal 
negative areas of the original B_smooth map. Nanahope and Humu don't have these 
problems and the fits looks more reasonable as far as I can tell in Gaia.

  You can try dividing the temp_02 fits produced by humu (or nanahope)
  and  lehuakona and see that there are plenty of pixels that are very
  far from 1.0....

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