How does the data look before any correction? What kind sequence did you
use to acquire this data?
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of Mike Yassa
Sent: Thursday, September 17, 2009 6:20 PM
To: [log in to unmask]
Subject: [FSL] volume corruption
Hi,
I am running FSL's eddycorrect on some high-resolution coronal DTI
data, and for a few subjects, the output seems to have "blanked" a few
of the diffusion weighted volumes. These volumes are either simply
blank or contain just a cut of the brain (see attached). Anyone have
any experience with this or know what the problem may be?
If it's because of too much motion, is there a way in FSL to censor
these volumes and extract them out and remake the series without them?
Thanks
Mike
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