That should work - providing your fMRI are not too distorted to
coregister with the T1w.
Best regards,
-John
On Wed, 2009-08-19 at 16:16 +1000, Chao Suo wrote:
> -
>
> Dear all,
>
>
>
> I am working on resting-state fmri data. There is no sessions or tasks
> for each subject, so there’s no first level analysis. Instead, the
> Functional Connectivity map is the result of resting-state fmri, which
> show the correlation between a seed area and whole brain. The “REST”
> toolbox can generate the FC map, however, the pre-processing should be
> done using SPM. I want to try DARTEL to do this, so I propose a
> pipeline, base on the emails on the email list. Because I am a
> beginner for Dartel. Could you please kindly give some comments on it?
>
>
>
> 1. Coregister T1 onto first functional image
>
>
>
> 2. Slice timing, Realign fMRI (reference on the first functional
> image)
>
>
>
> 3. Use all T1 images --> Dartel
>
>
>
> 4. Generate FC map of each subject, then apply the affine matrix and
> flow fields of each T1 on FC map.
>
>
>
> Regards
>
>
>
> Chao Suo
>
>
--
John Ashburner <[log in to unmask]>
|