Hello Amrita,
Now that you have imported the BMRB data into Analysis you have the
chemical shift information in your analysis project. As Vicky
mentioned earlier, you can
> Go to the 'Resonance' Menu and then select 'Reference Chemical
> Shifts' -
> this will give you a pop-up with the BRMB reference chemical shifts.
- if you want to see the shifts. You could also export them to other
formats using format converter if that's what you wanted to do, or you
can begin to create peak lists from them using Analysis.
Does that help? What do you want to do with the shifts now that you
have them?
Dan
On 7 Jul 2009, at 05:21, Amrita Kumari wrote:
> Dear sir,
>
> I have done this much what you have written, but now i want to know
> using
> format converter how can i get chemical shift information from BMRB
> files.
>
>
> Thanks,
> Amrita
>> Hello Amrita,
>>
>> Vicky is correct, but I think she assumed that you had already loaded
>> your BMRB file. To get the data into CCPN Analysis, first open
>> Analysis and create a new project Project -> New
>>
>> When you've done that, open the format converter (to convert the BMRB
>> file)
>>
>> click Other -> format converter
>>
>> When you have the format converter, import your NmrSTAR file with
>>
>> import -> single files -> chemical shifts -> NMRStar
>>
>> and then follow the instructions..
>>
>> Hope that helps!
>>
>> Dan
>>
>> On 6 Jul 2009, at 20:26, Amrita Kumari wrote:
>>
>>> Thanks for reply sir, I have gone to 'Resonance' Menu then to
>>> 'Referenced
>>> chemical shifts' but there they have just given one pop-up window
>>> but how
>>> to download and install that pop-up window I don't know and they
>>> have not
>>> given how to get chemical shift information of amino acids from
>>> BMRB. In
>>> BMRB NmrSTAR files chemical shifts are there I want that using CCPN
>>> is it
>>> possible to get those chemical shifts or not means without opening
>>> the
>>> file from BMRB is it possible to get that information from CCPN or
>>> not.I
>>> hope I am clear. As I need it.Looking forward for soon reply.
>>>
>>> Thanks,
>>> Amrita
>>>> Dear Amrita,
>>>>
>>>> Go to the 'Resonance' Menu and then select 'Reference Chemical
>>>> Shifts' -
>>>> this will give you a pop-up with the BRMB reference chemical
>>>> shifts.
>>>>
>>>> Best wishes,
>>>>
>>>> Vicky
>>>>
>>>>
>>>> Amrita Kumari wrote:
>>>>> Dear sir,
>>>>>
>>>>> I want to know using CCPN is it possible to extarct chemical shift
>>>>> information of amino acids from BMRB or Ref-DB or not? And if
>>>>> possible
>>>>> then how to get that. Looking forward for reply.
>>>>>
>>>>> Thanks,
>>>>> Amrita Kumari
>>>>> Research Fellow
>>>>> IISER Mohali
>>>>> Chandigarh
>>>>> INDIA
>>>>>
>>>>>
>>>>
>>>> --
>>>> *********************************************************
>>>> Dr. Victoria A. Higman
>>>>
>>>> Leibniz-Institut fuer Molekulare Pharmakologie (FMP)
>>>> NMR-Supported Structural Biology
>>>> Robert-Roessle-Str. 10
>>>> 13125 Berlin
>>>> Germany
>>>> and
>>>> School of Chemistry
>>>> University of Bristol
>>>> Bristol BS8 1TS
>>>> United Kingdom
>>>>
>>>> Phone: +44-117-95-46325
>>>> E-mail: [log in to unmask] (or [log in to unmask])
>>>>
>>>> http://www.protein-nmr.org.uk
>>>> *********************************************************
>>>>
>>>
>>>
>>> Amrita Kumari
>>> Research Fellow
>>> IISER Mohali
>>> Chandigarh
>>> INDIA
>>
>> Daniel O'Donovan
>> [log in to unmask]
>>
>>
>>
>>
>
>
> Amrita Kumari
> Research Fellow
> IISER Mohali
> Chandigarh
> INDIA
Daniel O'Donovan
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