Hi,
Now, I have a problem with bedpostx step.
When I checked the data, following infomration was showed.
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[fsl@localhost for_BEDPOSTX]$ bedpostx_datacheck .
./data
data_type INT16
dim1 256
dim2 256
dim3 38
dim4 26
datatype 4
pixdim1 0.7799999714
pixdim2 0.7799999714
pixdim3 3.5000000000
pixdim4 1.0000000000
cal_max 0.0000
cal_min 0.0000
file_type NIFTI-1+
./nodif_brain_mask
data_type INT16
dim1 256
dim2 256
dim3 38
dim4 1
datatype 4
pixdim1 0.7799999714
pixdim2 0.7799999714
pixdim3 3.5000000000
pixdim4 1.0000000000
cal_max 0.0000
cal_min 0.0000
file_type NIFTI-1+
num lines in ./bvals
1
num words in ./bvals
26
num lines in ./bvecs
3
num words in ./bvecs
78
---------------------------
Does that correct data format??
After running bedpostx, I get the following error message in a separate
window during "Queuing post processing state". Images were 38 slices, so 37
slices processed. What's the problem? Please, anyone help me...
-------------------------
window name "prompt" already exists in parent
window name "prompt" already exists in parent
while executing
"toplevel .prompt -borderwidth 5"
(procedure "MxPause" line 4)
invoked from within
"MxPause "Errors: $junk""
(procedure "fdt_monitor" line 29)
invoked from within
"fdt_monitor $w "${FSLDIR}/bin/bedpostx $bedpost(directory) -n $bedpost
(nfibres) -w $bedpost(weight) -b $bedpost(burnin)""
("bedpostx" arm line 28)
invoked from within
"switch -- $probtrack(tool) {
eddy_current {
global eddy
set errorStr ""
if { $eddy(input) == "" } { set errorStr "You need to specify..."
(procedure "fdt:apply" line 5)
invoked from within
"fdt:apply .fdt keep"
invoked from within
".fdt.apply invoke"
("uplevel" body line 1)
invoked from within
"uplevel #0 [list $w invoke]"
(procedure "tk::ButtonUp" line 22)
invoked from within
"tk::ButtonUp .fdt.apply"
(command bound to event)
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