Hi everyone,
I am analyzing many FAIR datasets. However, the contrast difference between
tag and control seems to be too large for MCFLIRT to work properly (see
attached). I was wondering if others have experienced this problem, and what
solutions have been proposed. The course of action most obvious to me is to
motion-correct control and tag separately. Is it possible to call MCFLIRT on
the even and odd timepoints separately? Or would I have to separate out the
time courses myself (e.g. in Matlab)?
Any help is appreciated. Thanks!
Nicole
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