Hi,
Yes, filtered_func_data is generated after the motion correction
is run (assuming you asked for motion correction to be run, which
we recommend that you do).
All the best,
Mark
On 23 Jun 2009, at 17:19, Ignacio Cifre wrote:
> Dear colleagues,
>
> I'm extracting timeseries using fslmeants and filtered_func_data. I
> want to be
> absolutely sure about an issue , which fsl web doesn't clarify enough.
>
> The question is if timeseries are already motion corrected in the file
> filtered_func_data, or is there any additional steps I need to do ?
>
> I'm using this command,
> which uses a filtered_func_data, obtained running PICA, and a mask
> from hippocampus, to obtain all voxels timeseries:
>
> fslmeants -i /HB_a240_brain.ica/reg_standard/filtered_func_data.nii.gz
> -m left_hippocamp_resized.nii.gz -o cHB_left.txt --showall
>
> Thank you very much for your help.
>
> Ignacio
>
>
>
> /-------------------------------------------------------------------------------------------/
> /-------------------------------------------------------------------------------------------/
> Ignacio Cifre León
>
> Dep. of Psychology
> University of Balearic Islands
> Crr. Valldemossa km.7.5
> Mallorca
>
> Dep. of Behavioural Methods.
> University of Barcelona
> Ps. Vall d'Hebron 171
> Barcelona
>
> mailto: [log in to unmask] // [log in to unmask]
> /-------------------------------------------------------------------------------------------/
> /-------------------------------------------------------------------------------------------/
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