Hi,
I would also check your environment set-up, and particularly your
PATH variable, as it might just be that this is unable to find the
correct version. The "not found" error certainly indicates a
problem with the path.
All the best,
Mark
On 29 May 2009, at 12:29, Evi Vanoost wrote:
> We had the same issue when upgrading our machines recently.
>
> Are you still on PowerPC machines or Intel machines? For PowerPC
> machines we had to find and download an older version of dcm2nii and
> for Intel machines we had to find and download the latest version of
> dcm2nii. Although they're supposed to be Universal or translated
> with Rosetta, they don't work the same on either platform.
>
> Let me know if you need copies of the old dcm2nii software
>
> Evi
>
> On May 29, 2009, at 2:34 AM, Ajay Garg wrote:
>
>> Dear FSL expert,
>>
>> I am not able to convert dicom to nifti with dcm2nii software.
>>
>> I am using mac platform and was able to convert dicom into nifti
>> format with dcm2nii using both gui and command line earlier. Last
>> week, I had to reinstall my mac OS and all other softwares.
>>
>> Now when I convert dicom to nifti with dcm2niigui, I get multiple
>> files, each one for each direction. I had selected compressed FSL
>> 4D nifti in the output. I also don't get bvec and bval file which I
>> used to get earlier. I don't know the reason. Earlier I used to get
>> single nifti file, one bval and one bvec file.
>>
>> I also installed dcm2nii. Earlier I was able to convert dicom to
>> nifti via terminal window. Now I get the error that command not
>> found. The dcm2nii file is there in my home folder.
>>
>>
>> I am not sure where I went wrong.
>>
>> Ajay
>>
>
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