Thanks for replying to my last two messages.
I'm using v4.1.0. Any thoughts?
Also, I think the eddy_correct problem might have to do with the dcm2nii
converter you suggested. As I mentioned in my last post, I had some DTI data
in mosaic form that was smoothly converted to NIFTI format using mcverter. I
could run eddy_correct and dtifit without incident on this data. I tried
converting this same data using dcm2nii and it appeared to work fine untill
I ran into the eddy_correct problem. I noticed that some of the header
information was different between the NIFTI files the that mcverter output
and dcm2nii output. In particular the sform and qform matrices are different
and the pixdim4 values are different along with some other fields in the
header. I don't know...
Again, any thoughts?
-Thanks!
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