Maybe you ran out of disk space or quota?
If this isn't the answer then I would check whether the FLIRT output
image example_func2highres and transform file example_func2highres.mat
seem to exist in the reg subdirectory.
Cheers.
On 15 May 2009, at 16:35, Ignasi Cifre wrote:
> Hi,
> I'm experiencing the same problem,
>
> I tried with the same parameters and volumes with Macintosh and
> Linux, only Linux distro
> (any distro) has this issue.
> May it be a permissions issue? I've also tried to open all
> permissions of fsl folder, but no
> change.
> Thanks all.
> Ignasi Cifre
>
> /usr/local/fsl/bin/slicer example_func2highres highres -s 2 -x 0.35
> sla.png -x 0.45 slb.png
> -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y
> 0.55 slg.png -y 0.65
> slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65
> sll.png ;
> /usr/local/fsl/bin/pngappend sla.png + slb.png + slc.png + sld.png +
> sle.png + slf.png +
> slg.png + slh.png + sli.png + slj.png + slk.png + sll.png
> example_func2highres1.png ;
> /usr/local/fsl/bin/slicer highres example_func2highres -s 2 -x 0.35
> sla.png -x 0.45 slb.png
> -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y
> 0.55 slg.png -y 0.65
> slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65
> sll.png ;
> /usr/local/fsl/bin/pngappend sla.png + slb.png + slc.png + sld.png +
> sle.png + slf.png +
> slg.png + slh.png + sli.png + slj.png + slk.png + sll.png
> example_func2highres2.png ;
> /usr/local/fsl/bin/pngappend example_func2highres1.png -
> example_func2highres2.png
> example_func2highres.png; /bin/rm -f sl?.png
> sh: line 1: 6489 Violación de segmento /usr/local/fsl/bin/slicer
> example_func2highres
> highres -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55 slc.png -x 0.65
> sld.png -y 0.35
> sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z 0.35
> sli.png -z 0.45 slj.png -z
> 0.55 slk.png -z 0.65 sll.png
>
> Cannot open sla.png for reading
> sh: line 1: 6491 Violacion de segmento /usr/local/fsl/bin/
> pngappend sla.png + slb.png +
> slc.png + sld.png + sle.png + slf.png + slg.png + slh.png + sli.png
> + slj.png + slk.png +
> sll.png example_func2highres1.png
> sh: line 1: 6492 Violacion de segmento /usr/local/fsl/bin/slicer
> highres
> example_func2highres -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55
> slc.png -x 0.65 sld.png
> -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z
> 0.35 sli.png -z 0.45
> slj.png -z 0.55 slk.png -z 0.65 sll.png
>
> Cannot open sla.png for reading
> sh: line 1: 6493 Violacion de segmento /usr/local/fsl/bin/
> pngappend sla.png + slb.png +
> slc.png + sld.png + sle.png + slf.png + slg.png + slh.png + sli.png
> + slj.png + slk.png +
> sll.png example_func2highres2.png
>
> Cannot open example_func2highres1.png for reading
> sh: line 1: 6494 Violacion de segmento /usr/local/fsl/bin/pngappend
> example_func2highres1.png - example_func2highres2.png
> example_func2highres.png
>
---------------------------------------------------------------------------
Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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