Are you really able to look at all of the volumes in epidewarp in fslview?
Do they all look normal? Is this on a local file system or a network share
(if so what kind of share), and what is the OS.
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of Jeremy Young
Sent: Friday, May 08, 2009 11:21 AM
To: [log in to unmask]
Subject: [FSL] eddy correct error
> Hello,
>
> Actually, after clearing up space and running again, I am getting
> the same error. Should I try running epidewarp.fsl again?
>
> Jeremy
>
>
> On May 8, 2009, at 10:02 AM, Jeremy Young wrote:
>
>> Hello,
>>
>> I forgot to include that. When I try to open dewarped it is fine.
>>
>> I figured out what was wrong just now though: I ran out of space
>> on the hard drive I was using.
>>
>> Jeremy
>>
>>
>> On May 7, 2009, at 4:24 PM, Matt Glasser wrote:
>>
>>> What happens if you open dewarped in FSLView? Do you get the
>>> same error?
>>> If so, I am afraid that file is corrupted.
>>>
>>> Peace,
>>>
>>> Matt.
>>>
>>> -----Original Message-----
>>> From: FSL - FMRIB's Software Library [mailto:[log in to unmask]]
>>> On Behalf
>>> Of Jeremy Young
>>> Sent: Thursday, May 07, 2009 1:18 PM
>>> To: [log in to unmask]
>>> Subject: [FSL] eddy correct error
>>>
>>> Hello,
>>>
>>> I am trying to eddy correct an output from epidewarp.fsl. This
>>> has worked
>>> for all my other subjects, except for the curret one. Here is my
>>> command
>>> and the error message:
>>> eddy_correct dewarped.nii data 0
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 2306840
>>> number missing = 1625320 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz):
>>> data bytes needed = 3932160
>>> data bytes input = 0
>>> number missing = 3932160 (set to 0)
>>> etc.
>>>
>>> What does this mean? Would a simple restart fix this or is there
>>> something
>>> else that's wrong?
>>>
>>> Thanks!
>>> Jeremy
>>>
>>>
>>
>
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