If you have SPM8b (latest updates), then you should find this much easier, as
there is now an option to spatially normalise (and spatially blur) fMRI to
MNI space (as it incorporates an additional affine mapping between DARTEL
template and MNI template). I haven't had a chance to update the user guide
for DARTEL yet, but it should be reasonably straightforward to use.
I expect that the t stats should be increased, and look forward to any
feedback on whether this is the case.
Best regards,
-John
On Tuesday 24 March 2009 16:22, Amir Tahmasebi wrote:
> Dear John and SPMers,
>
> I am trying to use DARTEL for normalization of fMRI data. I have looked at
> "how to use DARTEL for normalizing fMRI con maps?" thread but it is not
> exactly what I was looking for.
>
> I was wondering how should I use the outputs of DARTEL ("u_rc1*.nii" and
> "Template_6.nii") to normalize my fMRI data which is already coregistered
> to the corresponding structural data.
>
> Thank you,
> Amir
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