I am trying to do a VBM analysis.
"fslvbm_1_bet -N" and "fslvbm_2_template -n" appear to work appropriately
(template_GM_4D looks good) but fslvbm_3_proc does not generate a
GM_mod_merg file.
Here is the contents of my stats folder:
design.con
fslvbm3b
fslvbm3b.o18784
design.mat
fslvbm3b.e18784
template_GM.nii.gz
and the contents of fslvbm3b.e18784 :
** ERROR (nifti_image_read): failed to find header file for 'GM_merg'
** ERROR: nifti_image_open(GM_merg): bad header info
Error: failed to open file GM_merg
Cannot open volume GM_merg for reading!
** ERROR (nifti_image_read): failed to find header file for 'GM_mod_merg'
** ERROR: nifti_image_open(GM_mod_merg): bad header info
Error: failed to open file GM_mod_merg
Cannot open volume GM_mod_merg for reading!
** ERROR (nifti_image_read): failed to find header file for 'GM_mod_merg_s2'
** ERROR: nifti_image_open(GM_mod_merg_s2): bad header info
Error: failed to open file GM_mod_merg_s2
ERROR: Could not open image GM_mod_merg_s2
ERROR: Program failed
An exception has been thrown
Failed to read volume GM_mod_merg_s2
Exiting
** ERROR (nifti_image_read): failed to find header file for 'GM_mod_merg'
** ERROR: nifti_image_open(GM_mod_merg): bad header info
Error: failed to open file GM_mod_merg
Cannot open volume GM_mod_merg for reading!
** ERROR (nifti_image_read): failed to find header file for 'GM_mod_merg_s3'
** ERROR: nifti_image_open(GM_mod_merg_s3): bad header info
Error: failed to open file GM_mod_merg_s3
ERROR: Could not open image GM_mod_merg_s3
ERROR: Program failed
An exception has been thrown
Failed to read volume GM_mod_merg_s3
Exiting
** ERROR (nifti_image_read): failed to find header file for 'GM_mod_merg'
** ERROR: nifti_image_open(GM_mod_merg): bad header info
Error: failed to open file GM_mod_merg
Cannot open volume GM_mod_merg for reading!
** ERROR (nifti_image_read): failed to find header file for 'GM_mod_merg_s4'
** ERROR: nifti_image_open(GM_mod_merg_s4): bad header info
Error: failed to open file GM_mod_merg_s4
ERROR: Could not open image GM_mod_merg_s4
ERROR: Program failed
An exception has been thrown
Failed to read volume GM_mod_merg_s4
Exiting
I have probably made a silly error somewhere. Any help would be much
appreciated, thanks.
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