Hi Amit,
so everything's fine... You initially sent the email as you thought there were only 20 volumes in your GM*_merg 4D images, but there are all your 27 subjects in it (look at the 4th dimension of your image).
Cheers,
Gwenaelle
PS: No need to send the email to both my personal address and FSL list :-)
--- En date de : Jeu 26.3.09, Amit Raheja <[log in to unmask]> a écrit :
> De: Amit Raheja <[log in to unmask]>
> Objet: Re: [FSL] Re : [FSL] FSL VBM
> À: [log in to unmask]
> Date: Jeudi 26 Mars 2009, 15h24
> Hi Gwenaelle,
>
> So there are 27 *_to_template_GM.nii.gz files in the struc
> directory
>
> Here's the fslinfo on the GM_merg.nii.gz file
>
> data_type FLOAT32
> dim1 91
> dim2 109
> dim3 91
> dim4 27
> datatype 16
> pixdim1 2.0000000000
> pixdim2 2.0000000000
> pixdim3 2.0000000000
> pixdim4 1.0000000000
> cal_max 0.0000
> cal_min 0.0000
> file_type NIFTI-1+
>
> Thanks again,
> Amit
>
> On Wed, 25 Mar 2009 08:28:34 -0700, Gwenaëlle DOUAUD
> <[log in to unmask]> wrote:
>
> >Hi Amit,
> >
> >everything seems fine here...
> >
> >How many *_to_template_GM.nii.gz do you have in your
> struc/ directory? And what is
> the output of fslinfo on GM_merg in your stats/?
> >
> >Cheers,
> >Gwenaelle
> >
> >
> >--- En date de : Mer 25.3.09, Amit Raheja
> <[log in to unmask]> a écrit :
> >
> >> De: Amit Raheja <[log in to unmask]>
> >> Objet: Re: [FSL] Re : [FSL] FSL VBM
> >> À: [log in to unmask]
> >> Date: Mercredi 25 Mars 2009, 16h18
> >> Hi Gwenaelle,
> >>
> >> So I constructed the template using the
> template_list file
> >> to randomly select 10/17 patients
> >> in the study group. Here are the fslvbm2a and 3a
> files.
> >> Thanks for your help.
> >>
> >> Regards,
> >> Amit
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