Hi,
We have had good results from using mri_convert (from FreeSurfer)
or dcm2nii (from mricron). Have you tried these?
All the best,
Mark
P.S. You can only attach very small files to emails that go to the
whole FSL list, to avoid everyone getting full mailboxes.
On 18 Mar 2009, at 09:05, Hallvard Røe Evensmoen wrote:
> I have tried to convert a series of 3d dicom images into nifti using
> dicom2nii, MRIConverter and LONI debabeler. The best I get is all the
> slices from the different volumes added together with dim3=1 (image
> attached). Anyone got a better suggestion than writing a scipt that
> first
> uses fslmerge to merge the 32 slices along the z axis to get the
> volumes and
> finally use fslmerge to merge the volumes in time.
>
>
> Yours sincerely
>
> Hallvard Røe Evensmoen
>
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