Hi,
It is known that BET doesn't do well when large amounts of neck are in
the image.
Try cutting this out (using fslroi) and run BET again.
This will probably fix it.
All the best,
Mark
Julian Henty wrote:
> Dear FSL,
>
> I am getting some strange results and I don't understand what is going
> wrong. Please see attached image. The command I used is
>
> bet2 input.nii output.nii -f 0.4
>
> Any help appreciated.
>
> Julian.
>
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