Perhaps the file is corrupted? Can you view it in FSLView?
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of Silviu Podariu
Sent: Tuesday, November 18, 2008 1:22 PM
To: [log in to unmask]
Subject: [FSL] bet command -> segmentation fault
Hello,
I just installed the latest FSL package on Linux laptop and I noticed a
strange thing. When doing a skull strip on an SPM produced ws-structural I
ran into a 'segmentation fault' problem repeatedly, without any other info.
Here is the command used:
bet wmstr_k033_33_0.hdr struct_mask -f 0.35 -c 78 96 68
An interesting fact is that I run into this problem for only one of the four
subjects I have data on (for the other three it works fine), while on a Mac
server on which I also have FSL installed the same command works for this
subject too (as well as for the others).
I think this may be a bug or something, for the laptop is quite new and
powerful (Dell Latitude D630, with 2 processors Intel Core 2 Duo T9300 @
2.5GHz, running an up to date Ubuntu Hardy Linux distribution, on 2GB of
RAM).
Any advice on this would be greatly apreciated, thank you,
Silviu Podariu
UNMC
Omaha, NE
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