Hi,
Yes, you can do this too, but you need a different schedule file.
I'm attaching the measurecost1.sch file which will allow you to
measure the cost associated with the -init matrix.
All the best,
Mark
On 6 Nov 2008, at 18:06, Siamak Yousefi wrote:
> Hi Mark,
>
> Thank you verry much for your nice comments. I used the -schedule
> option
> and got the result. However, I only want to compare to images with
> each
> other. Imagine, both of them are structural T1 images. I'm not going
> to
> compare the result of registration of EPI with structural T1. When I
> use this
> option to do this comparison, it also registers my images and after
> registering
> prints the result of cost function. I mean a simple least square
> error is enough
> for my application if FSL has such a command.
>
> Best,
> Siamak
>
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