Thanks Ben and All. After I changed to the lowcase, it showed up. I
can do what I want now.
Thank you very much.
Jin
Quoting Benjamin Wagner <[log in to unmask]>:
> Hello Jin,
>
> This is most like a case of mixed case, not a Windows issue. For the
> Pickatlas toolbox to show up in the SPM toolbox dropdown, its directory
> name must be in the same case as the command that calls it. So, if you
> have your directory named WFU_Pickatlas or anything with Uppercase
> letters, please rename it to the all lowercase: wfu_pickatlas. It
> should then show up in the toolbox listing.
>
> Ben
>
>
> -----Original Message-----
> From: SPM (Statistical Parametric Mapping) [mailto:[log in to unmask]]
> On Behalf Of Jin Bo
> Sent: Tuesday, October 07, 2008 9:22 AM
> To: [log in to unmask]
> Subject: Re: [SPM] How to mask 2-level results for specific brain
> regions
> Importance: High
>
> Thank you very much. This is exactly what I want. However, after I add
> the WFU_PickAtlas under toolbox directory, add the path on top of SPM, I
> cannot see it appeared in the toolbox menu. Is there something special
> about running this in windows? On the manual, it says that this has not
> been tested in windows.
>
> Thank you very much
>
> Jin
>
> Quoting "MCLAREN, Donald" <[log in to unmask]>:
>
>> If you have the WFU_PickAtlas toolbox installed....
>>
>> Open it from within SPM, from the toolbox menu. Then make your ROI and
>
>> save it. Close the PickAtlas.
>>
>> Now, when you go through the results menu, there will be an ROI open,
>> click yes.
>> Then, if you've saved the file; click saved file (otherwise select the
>
>> other open).
>>
>> Hopefully, this is what you wanted to do.
>>
>> On Mon, Oct 6, 2008 at 10:50 AM, Jin <[log in to unmask]> wrote:
>>
>>> Hi, All,
>>>
>>> I am trying to mask my 2-level results for one particular brain area,
> e.g.
>>> BA
>>> 9&46. I can get that template image file from WFU_PickAtlas. Where is
>
>>> the place that I can select this region as a mask on top of my group
>>> activation?
>>>
>>> Thank you very much
>>>
>>> Jin
>>>
>>
>>
>>
>> --
>> Best Regards, Donald McLaren
>> =====================
>> D.G. McLaren
>> University of Wisconsin - Madison
>> Neuroscience Training Program
>> Office: (608) 265-9672
>> Lab: (608) 256-1901 ext 12914
>> Cell: (773) 406 2464
>> =====================
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>
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>
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>>
>
>
>
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