Hi,
try dcm2nii
http://www.sph.sc.edu/comd/rorden/mricron/dcm2nii.html
if you have axial data. Sagittal planes may be screwed but they are rarely used for DTI anyway.
Cheers-
Andreas
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Von: FSL - FMRIB's Software Library im Auftrag von Thomas Doring
Gesendet: Di 14.10.2008 15:28
An: [log in to unmask]
Betreff: [FSL] nii conversion with bvecs, bvals & Mac
Dear all,
I was wondering how to convert in a practical way the dti-dicom data to nii format with the extraction of bvals, bvecs for later use in dtifit with a Mac-system
The MRIconvert tool of Jolinda works fine in windows and Linux with the wine emulator.
I couldnīt figure out how to do this via X11 in my Mac. The best way would be writing a Script to process all subjects in an easy way.
I would appreciate it if somebody could give me some hints about that issue.
Thanks in advance,
Cheers,
Thomas
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