Hi Jesper,
My path doesn't contain any dot (.) ,though the problem still exists. To be
more specific my path is specified as follows:
$FSLDIR/etc/flirtsch ,where echo $FSLDIR = usr/share/fsl.
Regarding the problem i've encountered,details were mentioned in September's
archives with title "following different order on VBM analysis steps"
Any ideas?
Thank you
Antonios-Constantine Thanellas
On Mon, 6 Oct 2008 13:00:02 +0200, Jesper Andersson <[log in to unmask]>
wrote:
>Dear everyone,
>
>there has been several mails about fnirt not finding the
>configuration files it is supposed to find. This has now been fixed
>and will be part of the next release.
>
>It turns out that the problem occurs when there is a "dot" (.)
>somewhere in the path ${FSLDIR}/etc/flirtsch/. For example if FSLDIR
>is set to /usr/local/fsl4.1
>
>Meanwhile you can work around it by copying the existing .cnf files
>in ${FSLDIR}/etc/flirtsch/ so that there are versions both with and
>without the extension. Just remember to delete the extension free
>ones when you install the next release of fsl.
>
>Good Luck Jesper
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