Hi everybody,
I am encountering very strange behavior in fslview: I used 3dAFNI2NIFTI to
convert two afni BRIKs to nifti. One of the volumes is a highres image, the
other an atlas. If I look at the nifti images with fslview, the atlas does
not match the highres. The differences are not huge, but clearly noticeable
(it is not just a left-right issue either). If I look at the same two images
with MRIcron the two images match perfectly!
Seems to be a conversion problem. Thus, I tried to use a different
conversion routine and found a reference to fsl's afni2awv routine on the
net. However, my fsl-installation (4.0) does not seem to incorporate this
routine. I also checked for similar routines like afni2fsl or afni2nifti,
but I did not find anything.
Any help is greatly appreciated!
Best,
Tobias
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