Hi Anastasia,
yes the odd orientation of your scans is definitely the issue!
You need to reorient them (be careful not to get lost in your L/R) using fslswapdim command beforehand.
Cheers,
Gwenaelle
--- En date de : Mer 9.7.08, Anastasia Ford <[log in to unmask]> a écrit :
> De: Anastasia Ford <[log in to unmask]>
> Objet: Re: [FSL] Re : [FSL] TBSS registration fails
> À: [log in to unmask]
> Date: Mercredi 9 Juillet 2008, 14h55
> Yes, both controls and patients.
> The only thing I could think of would be the image
> orientation. All of the
> images are oriented differently than what Im used to (we
> are using a
> different scanner). Ive attached a screenshot of the
> original FA.
_____________________________________________________________________________
Envoyez avec Yahoo! Mail. Une boite mail plus intelligente http://mail.yahoo.fr
|