Dear list,
I'm having the same problem as Judith My Lin Lam in the thread "Vectors must
be the same lengths" started on 21 May 2007. However, in my situation, I'm
trying to estimate a factorial design.
When I run the job from the command line, I get the following error messages:
>>>
??? Error using ==> plot
Vectors must be the same lengths.
Error in ==> spm_spm at 811
plot(SPM.xGX.rg)
Error in ==> spm_config_fmri_est>run_est at 390
SPM = spm_spm(SPM);
Error in ==> spm_jobman>run_struct1 at 1474
feval(prog,val);
Error in ==> spm_jobman>run_struct1 at 1482
run_struct1(c.val{i});
Error in ==> spm_jobman>run_struct1 at 1482
run_struct1(c.val{i});
Error in ==> spm_jobman>run_job at 417
run_struct1(c);
Error in ==> spm_jobman at 79
run_job(varargin{2});
<<<
The script is in attachment.
Sincerely,
Seppe Santens
% -jobs
% \-jobs{1}
% \-stats
% |-stats{1}
% | \-factorial_design
% | |-des
% | | \-fd
% | | |-fact
% | | | |-name .............. SCANS
% | | | |-levels ............ 1-x-1 double
% | | | |-dept .............. 1-x-1 double
% | | | |-variance .......... 1-x-1 double
% | | | |-gmsca ............. 1-x-1 double
% | | | \-ancova ............ 1-x-1 double
% | | \-icell
% | | |-icell(1)
% | | | |-levels ............ 1-x-1 double
% | | | \-scans
% | | | |-scans{1,1} ........
%D:\home\chantal\bolsummation_SPM\ppn01\results\GLM_1\con_0003.img,1
% | | | |-scans{2,1} ........
%D:\home\chantal\bolsummation_SPM\ppn02\results\GLM_1\con_0003.img,1
% | | | |-scans{3,1} ........
%D:\home\chantal\bolsummation_SPM\ppn03\results\GLM_1\con_0003.img,1
% | | | |-scans{4,1} ........
%D:\home\chantal\bolsummation_SPM\ppn04\results\GLM_1\con_0003.img,1
% | | | |-scans{5,1} ........
%D:\home\chantal\bolsummation_SPM\ppn05\results\GLM_1\con_0003.img,1
% | | | |-scans{6,1} ........
%D:\home\chantal\bolsummation_SPM\ppn07\results\GLM_1\con_0003.img,1
% | | | |-scans{7,1} ........
%D:\home\chantal\bolsummation_SPM\ppn08\results\GLM_1\con_0003.img,1
% | | | |-scans{8,1} ........
%D:\home\chantal\bolsummation_SPM\ppn09\results\GLM_1\con_0003.img,1
% | | | |-scans{9,1} ........
%D:\home\chantal\bolsummation_SPM\ppn10\results\GLM_1\con_0003.img,1
% | | | |-scans{10,1} .......
%D:\home\chantal\bolsummation_SPM\ppn11\results\GLM_1\con_0003.img,1
% | | | |-scans{11,1} .......
%D:\home\chantal\bolsummation_SPM\ppn12\results\GLM_1\con_0003.img,1
% | | | |-scans{12,1} .......
%D:\home\chantal\bolsummation_SPM\ppn13\results\GLM_1\con_0003.img,1
% | | | |-scans{13,1} .......
%D:\home\chantal\bolsummation_SPM\ppn14\results\GLM_1\con_0003.img,1
% | | | |-scans{14,1} .......
%D:\home\chantal\bolsummation_SPM\ppn15\results\GLM_1\con_0003.img,1
% | | | |-scans{15,1} .......
%D:\home\chantal\bolsummation_SPM\ppn16\results\GLM_1\con_0003.img,1
% | | | |-scans{16,1} .......
%D:\home\chantal\bolsummation_SPM\ppn17\results\GLM_1\con_0003.img,1
% | | | |-scans{17,1} .......
%D:\home\chantal\bolsummation_SPM\ppn18\results\GLM_1\con_0003.img,1
% | | | |-scans{18,1} .......
%D:\home\chantal\bolsummation_SPM\ppn19\results\GLM_1\con_0003.img,1
% | | | |-scans{19,1} .......
%D:\home\chantal\bolsummation_SPM\ppn20\results\GLM_1\con_0003.img,1
% | | | |-scans{20,1} .......
%D:\home\chantal\bolsummation_SPM\ppn21\results\GLM_1\con_0003.img,1
% | | | |-scans{21,1} .......
%D:\home\chantal\bolsummation_SPM\ppn22\results\GLM_1\con_0003.img,1
% | | | \-scans{22,1} .......
%D:\home\chantal\bolsummation_SPM\ppn23\results\GLM_1\con_0003.img,1
% | | \-icell(2)
% | | |-levels ............ 1-x-1 double
% | | \-scans
% | | |-scans{1,1} ........
%D:\home\chantal\bolsummation_SPM\ppn01\results\GLM_1\con_0004.img,1
% | | |-scans{2,1} ........
%D:\home\chantal\bolsummation_SPM\ppn02\results\GLM_1\con_0004.img,1
% | | |-scans{3,1} ........
%D:\home\chantal\bolsummation_SPM\ppn03\results\GLM_1\con_0004.img,1
% | | |-scans{4,1} ........
%D:\home\chantal\bolsummation_SPM\ppn04\results\GLM_1\con_0004.img,1
% | | |-scans{5,1} ........
%D:\home\chantal\bolsummation_SPM\ppn05\results\GLM_1\con_0004.img,1
% | | |-scans{6,1} ........
%D:\home\chantal\bolsummation_SPM\ppn07\results\GLM_1\con_0004.img,1
% | | |-scans{7,1} ........
%D:\home\chantal\bolsummation_SPM\ppn08\results\GLM_1\con_0004.img,1
% | | |-scans{8,1} ........
%D:\home\chantal\bolsummation_SPM\ppn09\results\GLM_1\con_0004.img,1
% | | |-scans{9,1} ........
%D:\home\chantal\bolsummation_SPM\ppn10\results\GLM_1\con_0004.img,1
% | | |-scans{10,1} .......
%D:\home\chantal\bolsummation_SPM\ppn11\results\GLM_1\con_0004.img,1
% | | |-scans{11,1} .......
%D:\home\chantal\bolsummation_SPM\ppn12\results\GLM_1\con_0004.img,1
% | | |-scans{12,1} .......
%D:\home\chantal\bolsummation_SPM\ppn13\results\GLM_1\con_0004.img,1
% | | |-scans{13,1} .......
%D:\home\chantal\bolsummation_SPM\ppn14\results\GLM_1\con_0004.img,1
% | | |-scans{14,1} .......
%D:\home\chantal\bolsummation_SPM\ppn15\results\GLM_1\con_0004.img,1
% | | |-scans{15,1} .......
%D:\home\chantal\bolsummation_SPM\ppn16\results\GLM_1\con_0004.img,1
% | | |-scans{16,1} .......
%D:\home\chantal\bolsummation_SPM\ppn17\results\GLM_1\con_0004.img,1
% | | |-scans{17,1} .......
%D:\home\chantal\bolsummation_SPM\ppn18\results\GLM_1\con_0004.img,1
% | | |-scans{18,1} .......
%D:\home\chantal\bolsummation_SPM\ppn19\results\GLM_1\con_0004.img,1
% | | |-scans{19,1} .......
%D:\home\chantal\bolsummation_SPM\ppn20\results\GLM_1\con_0004.img,1
% | | |-scans{20,1} .......
%D:\home\chantal\bolsummation_SPM\ppn21\results\GLM_1\con_0004.img,1
% | | |-scans{21,1} .......
%D:\home\chantal\bolsummation_SPM\ppn22\results\GLM_1\con_0004.img,1
% | | \-scans{22,1} .......
%D:\home\chantal\bolsummation_SPM\ppn23\results\GLM_1\con_0004.img,1
% | |-masking
% | | |-tm
% | | | \-tm_none ........... []
% | | |-im ................ 1-x-1 double
% | | \-em
% | | \-em{1} ............. []
% | |-globalc
% | | \-g_omit ............ []
% | |-globalm
% | | |-gmsca
% | | | \-gmsca_no .......... []
% | | \-glonorm ........... 1-x-1 double
% | \-dir
% | \-dir{1} ............
%D:\home\chantal\bolsummation_SPM\2nd_level\GLM_1\conjunction
% \-stats{2}
% \-fmri_est
% |-spmmat
% | \-spmmat{1} .........
%D:\home\chantal\bolsummation_SPM\2nd_level\GLM_1\conjunction\SPM.mat
% \-method
% \-Classical ......... 1-x-1 double
% -jobs
% \-stats
jobs{1}.stats{1}.factorial_design.des.fd.fact.name = char([
'SCANS'
]);
jobs{1}.stats{1}.factorial_design.des.fd.fact.levels = reshape(double([
2
]),[1,1]);
jobs{1}.stats{1}.factorial_design.des.fd.fact.dept = reshape(double([
0
]),[1,1]);
jobs{1}.stats{1}.factorial_design.des.fd.fact.variance = reshape(double([
1
]),[1,1]);
jobs{1}.stats{1}.factorial_design.des.fd.fact.gmsca = reshape(double([
0
]),[1,1]);
jobs{1}.stats{1}.factorial_design.des.fd.fact.ancova = reshape(double([
0
]),[1,1]);
% | | \-icell
%==============================================================
% jobs{1}.stats{1}.factorial_design.des.fd.icell
%==============================================================
%--------------------------------------------------------------
% jobs{1}.stats{1}.factorial_design.des.fd.icell(1)
%--------------------------------------------------------------
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).levels = reshape(double([
1
]),[1,1]);
% | | | \-scans
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{1,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn01\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{2,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn02\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{3,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn03\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{4,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn04\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{5,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn05\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{6,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn07\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{7,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn08\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{8,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn09\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{9,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn10\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{10,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn11\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{11,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn12\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{12,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn13\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{13,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn14\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{14,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn15\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{15,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn16\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{16,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn17\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{17,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn18\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{18,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn19\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{19,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn20\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{20,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn21\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{21,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn22\results\GLM_1\con_0003.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(1).scans{22,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn23\results\GLM_1\con_0003.img,1'
]);
%--------------------------------------------------------------
% jobs{1}.stats{1}.factorial_design.des.fd.icell(2)
%--------------------------------------------------------------
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).levels = reshape(double([
2
]),[1,1]);
% | | \-scans
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{1,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn01\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{2,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn02\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{3,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn03\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{4,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn04\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{5,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn05\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{6,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn07\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{7,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn08\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{8,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn09\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{9,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn10\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{10,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn11\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{11,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn12\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{12,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn13\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{13,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn14\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{14,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn15\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{15,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn16\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{16,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn17\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{17,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn18\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{18,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn19\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{19,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn20\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{20,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn21\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{21,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn22\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.des.fd.icell(2).scans{22,1} = char([
'D:\home\chantal\bolsummation_SPM\ppn23\results\GLM_1\con_0004.img,1'
]);
jobs{1}.stats{1}.factorial_design.cov = struct([]);
jobs{1}.stats{1}.factorial_design.masking.tm.tm_none = reshape(double([
[]
]),[0,0]);
jobs{1}.stats{1}.factorial_design.masking.im = reshape(double([
1
]),[1,1]);
% | | \-em
jobs{1}.stats{1}.factorial_design.masking.em{1} = char([
'[]'
]);
jobs{1}.stats{1}.factorial_design.globalc.g_omit = reshape(double([
[]
]),[0,0]);
jobs{1}.stats{1}.factorial_design.globalm.gmsca.gmsca_no = reshape(double([
[]
]),[0,0]);
jobs{1}.stats{1}.factorial_design.globalm.glonorm = reshape(double([
1
]),[1,1]);
% | \-dir
jobs{1}.stats{1}.factorial_design.dir{1} = char([
'D:\home\chantal\bolsummation_SPM\2nd_level\GLM_1\conjunction'
]);
% |-spmmat
jobs{1}.stats{2}.fmri_est.spmmat{1} = char([
'D:\home\chantal\bolsummation_SPM\2nd_level\GLM_1\conjunction\SPM.mat'
]);
jobs{1}.stats{2}.fmri_est.method.Classical = reshape(double([
1
]),[1,1]);
|