Hello,
Tim did not use installCode.py (for the reason you mention). Which is why
he attached the environment.txt he used. This problem will be fixed.
Indeed, in the last half hour I have just managed to install Ubuntu 8.0.4
on my Mac (yes, I know, my poor Mac feels stabbed in the back). So I'll
be able to work with this more easily now.
Wayne
On Mon, 2 Jun 2008, Gary Thompson wrote:
> Tim Stevens wrote:
> >>> I tried installing the analysis package in Ubuntu 8.04. But it returns
> >>> the following error.
> >>>
> >>> My question is when will an error free ccpnmr package be released? In
> >>> fact I have been trying to install ccpnmr for the last 4 years in linux,
> >>> but never once succeeded. The precompiled version for Windows works
> >>> well, for a linux precompiled version will better.
> >>>
> >
> >
> > I have come out of hiding because I feel obliged to reply to this one.
> >
> > CCPN has definitely been installable on Linux systems for the past 4
> > years. It really does work and I suspect that a large proportion of the
> > CCPN users successfully use it under Linux.
> >
> > If there is a problem, after having a reasonable attempt at installation,
> > the best route would be to simply send an email to us at the _earliest_
> > opportunity. This way other users get the benefit of any improvements to
> > the installation script, documentation or whatever may be required. :-)
> >
> > Since its release I have personally been using Ubuntu 8.04 with CCPN.
> > After installing the packages (as described on the web site) thus:
> >
> >
> >> sudo apt-get install python-dev python-tk tk8.4-dev libx11-dev freeglut3-dev libglu1-mesa-dev
> >>
> >
> >
> >
> Hi Tim
>
> This sounds really good. It used to be that under ubuntu the 'python
> installCode.py' analysis script used to fail because the directory
> structure for tcl and tk under ubuntu didn't match that expected by the
> script. So did you use the 'python installCode.py' script?
>
> regards
> gary
> > Hopefully this seems to avoid any issues with the bundled Tcl/Tk that Gary
> > mentions. I used the attached environment.txt file, which goes into the
> > .../ccpnmr1.0/c/ directory inside the installation. There is a problem
> > with the install script with later Ubuntus, so until this is fixed a more
> > manual installation is needed. In the same directory I then do:
> >
> >
> >> make clean ; make ; make links
> >>
> >
> > To compile everything. If a bin/ directory is required for launching the
> > programs, then Wayne can give further instructions.
> >
> > T.
> >
> > -------------------------------------------------------------------------------
> > Dr Tim Stevens Email: [log in to unmask]
> > Department of Biochemistry [log in to unmask]
> > University of Cambridge Phone: +44 1223 766018 (office)
> > 80 Tennis Court Road +44 7816 338275 (mobile)
> > Old Addenbrooke's Site +44 1223 364613 (home)
> > Cambridge CB2 1GA WWWeb: http://www.bio.cam.ac.uk/~tjs23
> > United Kingdom http://www.ccpn.ac.uk
> > -------------------------------------------------------------------------------
> > ------ +NH3CH(CH(CH3)OH)C(O)NHCH(CH(CH3)CH2CH3)C(O)NHCH(CH2CH2SCH3)CO2- -------
> > -------------------------------------------------------------------------------
> >
> >
> > ------------------------------------------------------------------------
> >
> > # the C compiler
> > CC = cc
> > # use below for everything with -fPIC option (e.g. gcc)
> > CFLAGS = -O -m64 -fPIC
> >
> > # shared
> > SHARED_FLAGS = -shared
> >
> > # math
> > MATH_LIB = -lm
> >
> > # X11
> > X11_DIR = /usr/X11R6
> > X11_LIB = -lX11 -lXext
> > X11_INCLUDE_FLAGS = -I$(X11_DIR)/include
> > X11_LIB_FLAGS = -L$(X11_DIR)/lib64
> >
> > # Tcl
> > TCL_DIR = /usr
> > TCL_LIB = -ltcl8.4
> > TCL_INCLUDE_FLAGS = -I$(TCL_DIR)/include/tcl8.4
> > TCL_LIB_FLAGS = -L$(TCL_DIR)/lib64
> >
> > # Tk
> > TK_DIR = /usr
> > TK_LIB = -ltk8.4
> > TK_INCLUDE_FLAGS = -I$(TK_DIR)/include/tcl8.4
> > TK_LIB_FLAGS = -L$(TK_DIR)/lib64
> >
> > # Python
> > PYTHON_DIR = /usr
> > PYTHON_INCLUDE_FLAGS = -I$(PYTHON_DIR)/include/python2.5
> >
> > IGNORE_GL_FLAG =
> > # use below if you want to ignore GL
> > #IGNORE_GL_FLAG = -DIGNORE_GL
> >
> > GLUT_FLAG = -DNEED_GLUT_INIT
> >
> > # GL
> > GL_DIR = /usr
> > GL_LIB = -lglut -lGLU -lGL
> > GL_INCLUDE_FLAGS = -I$(GL_DIR)/include
> > GL_LIB_FLAGS = -L$(GL_DIR)/lib64
> >
>
>
> --
> -------------------------------------------------------------------
> Dr Gary Thompson
> Astbury Centre for Structural Molecular Biology,
> University of Leeds, Astbury Building,
> Leeds, LS2 9JT, West-Yorkshire, UK Tel. +44-113-3433024
> email: [log in to unmask] Fax +44-113-2331407
> -------------------------------------------------------------------
>
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