JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for LCG-ROLLOUT Archives


LCG-ROLLOUT Archives

LCG-ROLLOUT Archives


LCG-ROLLOUT@JISCMAIL.AC.UK


View:

Message:

[

First

|

Previous

|

Next

|

Last

]

By Topic:

[

First

|

Previous

|

Next

|

Last

]

By Author:

[

First

|

Previous

|

Next

|

Last

]

Font:

Proportional Font

LISTSERV Archives

LISTSERV Archives

LCG-ROLLOUT Home

LCG-ROLLOUT Home

LCG-ROLLOUT  May 2008

LCG-ROLLOUT May 2008

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject:

Re: Fwd: [Fwd: Re: [LCG-ROLLOUT] recent optimizations in lcg-ce]

From:

IEETA_Grid_initiative <[log in to unmask]>

Reply-To:

LHC Computer Grid - Rollout <[log in to unmask]>

Date:

Wed, 7 May 2008 12:09:02 +0100

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (257 lines)

Hi Sergio,

So... any news about the 15001 error?

think I'm having a similar problem here.

from the WN logs (/var/spool/pbs/mom_logs/) I can see:

05/07/2008 08:25:00;0080;   pbs_mom;Req;req_reject;Reject reply
code=15001(Unknown Job Id REJHOST=axon-g06.ieeta.pt MSG=modify job
failed, unknown job 6733.axon-g01.ieeta.pt), aux=0, type=ModifyJob, from
[log in to unmask]

the odd thing is that in 4 equal jobs submitted by me 3 have concluded
successfully and 1 falls in "BatchHold" for eternity...

Like the following ones:

[luis@axon-g01 ~]$ showq
ACTIVE JOBS--------------------
JOBNAME            USERNAME      STATE  PROC   REMAINING
STARTTIME

6736                 bio012    Running     1  2:22:44:42  Wed May  7
10:20:39
6737                 bio012    Running     1  2:22:47:43  Wed May  7
10:23:40

     2 Active Jobs       2 of    6 Processors Active (33.33%)
                         1 of    3 Nodes Active      (33.33%)

IDLE JOBS----------------------
JOBNAME            USERNAME      STATE  PROC     WCLIMIT
QUEUETIME


0 Idle Jobs

BLOCKED JOBS----------------
JOBNAME            USERNAME      STATE  PROC     WCLIMIT
QUEUETIME

6684               dteam004  BatchHold     1  3:00:00:00  Tue May  6
17:39:42
6687               dteam004  BatchHold     1  3:00:00:00  Tue May  6
17:40:46
6697               dteam004  BatchHold     1  3:00:00:00  Tue May  6
17:47:44
6710                 opssgm  BatchHold     1  3:00:00:00  Tue May  6
22:32:06
6712               dteam004  BatchHold     1  3:00:00:00  Tue May  6
22:58:34
6724                 opssgm  BatchHold     1  3:00:00:00  Wed May  7
03:17:38
6739                 opssgm   Deferred     1  3:00:00:00  Wed May  7
11:30:00

Total Jobs: 9   Active Jobs: 2   Idle Jobs: 0   Blocked Jobs: 7

For instance:

[root@axon-g01 ~]# checkjob 6710


checking job 6710

State: Idle
Creds:  user:opssgm  group:ops  class:ops  qos:DEFAULT
WallTime: 00:00:16 of 3:00:00:00
SubmitTime: Tue May  6 22:32:06
  (Time Queued  Total: 13:05:59  Eligible: 00:00:00)

StartDate: -12:39:13  Tue May  6 22:58:52
Total Tasks: 1

Req[0]  TaskCount: 1  Partition: ALL
Network: [NONE]  Memory >= 0  Disk >= 0  Swap >= 0
Opsys: [NONE]  Arch: [NONE]  Features: [NONE]
NodeCount: 1


IWD: [NONE]  Executable:  [NONE]
Bypass: 0  StartCount: 26
PartitionMask: [ALL]
Holds:    Batch  (hold reason:  RMFailure)
Messages:  cannot start job - RM failure, rc: 15057, msg: 'Cannot
execute at specified host because of checkpoint or stagein files'
PE:  1.00  StartPriority:  1000758
cannot select job 6710 for partition DEFAULT (job hold active)

...and...

[root@axon-g01 ~]# diagnose -j 6710
Name                  State Par Proc QOS     WCLimit R  Min     User
Group  Account  QueuedTime  Network  Opsys   Arch    Mem   Disk  Procs
Class Features

6710                   Idle ALL    1 DEF  3:00:00:00 0    1   opssgm
ops        -    12:41:36   [NONE] [NONE] [NONE]    >=0    >=0    NC0
[ops:1] [NONE]
WARNING:  job '6710' has failed to start 26 times


[root@axon-g01 ~]# releasehold -a ALL; tail
-f /var/spool/pbs/server_logs/20080507

job holds adjusted

(...)

05/07/2008 12:00:09;0100;PBS_Server;Req;;Type StatusQueue request
received from [log in to unmask], sock=9
05/07/2008 12:00:09;0100;PBS_Server;Req;;Type StatusJob request received
from [log in to unmask], sock=9
05/07/2008 12:00:09;0100;PBS_Server;Req;;Type ModifyJob request received
from [log in to unmask], sock=9
05/07/2008 12:00:09;0008;PBS_Server;Job;6710.axon-g01.ieeta.pt;Job
Modified at request of [log in to unmask]
05/07/2008 12:00:09;0100;PBS_Server;Req;;Type RunJob request received
from [log in to unmask], sock=9
05/07/2008 12:00:09;0080;PBS_Server;Req;req_reject;Reject reply
code=15057(Cannot execute at specified host because of checkpoint or
stagein files), aux=0, type=RunJob, from [log in to unmask]
05/07/2008 12:00:09;0100;PBS_Server;Req;;Type ModifyJob request received
from [log in to unmask], sock=9
05/07/2008 12:00:09;0008;PBS_Server;Job;6710.axon-g01.ieeta.pt;Job
Modified at request of [log in to unmask]
05/07/2008 12:00:09;0100;PBS_Server;Req;;Type ModifyJob request received
from [log in to unmask], sock=9
05/07/2008 12:00:09;0008;PBS_Server;Job;6724.axon-g01.ieeta.pt;Job
Modified at request of [log in to unmask]
05/07/2008 12:00:09;0100;PBS_Server;Req;;Type RunJob request received
from [log in to unmask], sock=9
05/07/2008 12:00:09;0080;PBS_Server;Req;req_reject;Reject reply
code=15057(Cannot execute at specified host because of checkpoint or
stagein files), aux=0, type=RunJob, from [log in to unmask]
05/07/2008 12:00:09;0100;PBS_Server;Req;;Type ModifyJob request received
from [log in to unmask], sock=9
05/07/2008 12:00:09;0008;PBS_Server;Job;6724.axon-g01.ieeta.pt;Job
Modified at request of [log in to unmask]
05/07/2008 12:00:16;0100;PBS_Server;Req;;Type AuthenticateUser request
received from [log in to unmask], sock=12
05/07/2008 12:00:16;0100;PBS_Server;Req;;Type StatusJob request received
from [log in to unmask], sock=10
05/07/2008 12:00:22;0040;PBS_Server;Svr;axon-g01.ieeta.pt;Scheduler sent
command time
05/07/2008 12:00:22;0100;PBS_Server;Req;;Type StatusNode request
received from [log in to unmask], sock=9


(...)


This problem is driving me crazy for weeks...

- don't matter if I turn the firewall off
- CE/WN connection exists
- I have reinstalled the WNs metapackages

Please, any hint will be precious!

P.S. - Sorry for the long mail.

Thanks,

Luís


On Mon, 2008-05-05 at 23:43 +0200, Sergio Maffioletti wrote: 
> Hi Mario
> 
> could you detail what problem these two nodes are having ?
> we are experiencing a similar problem, except that it is not systematic
> 
> basically we are observing spooradics
> "MOM rejected modify request, error: 15001"
> messages; sometimes the job get started anyway
> some other times it fails the stagin operation
> then the job is sent back to the server and is placed in Q state, but
> then maui does not select it anymore.
> 
> we had two period of time during last weekend when we did observer the
> Globus error 94, and we wander whether the two things are correlated
> with each other or not
> 
> Cheers
> Sergio :)
> 
> On 05, May 2008 02:57 PM, Mario Kadastik <[log in to unmask]> wrote:
> 
> >Well actually we may have figured out the problem. It seems two
> >workernodes had problems with stageout, but not something one would
> >notice immediately out of hand. We have isolated them and now SAM
> >tests seem to be running fine (but we'll have to wait a bit longer to
> >make sure this was the problem indeed). We also ran a separate test of
> >a job on one of that workernodes and the logging information came back
> >with exactly the known error so we do hope we have isolated it now. We
> >will know in about 24h if all the SAM tests run through nicely.
> >
> >Mario
> >
> >On May 5, 2008, at 3:36 PM, <[log in to unmask]>
> ><[log in to unmask]
> >>wrote:
> >
> >>Hi Mario, Ilja,
> >>
> >>>>Anyway, the exact details are available from this ggus ticket:
> >>>>https://gus.fzk.de/pages/ticket_details.php?ticket=35655
> >>>>
> >>>>I have increased the maxproc settings of both "marshal"s as it
> >>>>seemed to be somehow related to the error ( Globus error 94: the
> >>>>jobmanager does not accept any new requests (shutting down)), will
> >>>>see if it helps.
> >>>>
> >>>>Any other ideas are still very welcome!
> >>
> >>It appears that the failing jobs were in fact successfully submitted
> >>to Torque. For example, in /opt/edg/var/gatekeeper/grid-
> >>jobmap_20080505
> >>(spaces replaced with newlines for clarity):
> >>
> >>"localUser=11860"
> >>"userDN=/DC=ch/DC=cern/OU=Organic Units/OU=Users/CN=samoper/
> >>CN=582979/CN=Judit Novak"
> >>"userFQAN=/ops/Role=lcgadmin/Capability=NULL"
> >>"userFQAN=/ops/Role=NULL/Capability=NULL"
> >>"jobID=https://rb113.cern.ch:9000/X3pf3fHmWWZTWr9nY5VvKQ"
> >>"ceID=oberon.hep.kbfi.ee:2119/jobmanager-lcgpbs-short"
> >>"lrmsID=42444.oberon.hep.kbfi.ee"
> >>"timestamp=2008-05-05 10:07:18"
> >>
> >>The job then may have been reported in such a way that the lcgpbs job
> >>manager considered the job as having failed. For example, the 'W'
> >>state
> >>is treated like that. In that case you would see a cancellation
> >>(qdel)
> >>request in the Torque logs. Can you check what happened to job 42444?
> >>
> 
> 
> 
> Cheers
> Sergio :)
> 
> ---------------------------------------------
>   Dr. Sergio Maffioletti
>  
>   Grid Group
>   CSCS, Swiss National Supercomputing Centre
>   Via Cantonale
>   CH-6928 Manno
>   Tel: +41916108218
>   Fax: +41916108282
>   email: [log in to unmask]
> ---------------------------------------------

Top of Message | Previous Page | Permalink

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

April 2024
March 2024
November 2023
June 2023
May 2023
April 2023
March 2023
February 2023
September 2022
June 2022
May 2022
April 2022
February 2022
December 2021
November 2021
October 2021
September 2021
July 2021
June 2021
May 2021
February 2021
January 2021
November 2020
September 2020
August 2020
July 2020
June 2020
May 2020
April 2020
March 2020
February 2020
January 2020
November 2019
October 2019
September 2019
August 2019
July 2019
June 2019
May 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
February 2018
January 2018
November 2017
October 2017
September 2017
July 2017
June 2017
May 2017
March 2017
February 2017
January 2017
December 2016
November 2016
October 2016
September 2016
August 2016
July 2016
June 2016
May 2016
April 2016
March 2016
February 2016
January 2016
December 2015
November 2015
October 2015
September 2015
August 2015
July 2015
June 2015
May 2015
April 2015
March 2015
February 2015
January 2015
December 2014
November 2014
October 2014
September 2014
August 2014
July 2014
June 2014
May 2014
April 2014
March 2014
February 2014
January 2014
December 2013
November 2013
October 2013
September 2013
August 2013
July 2013
June 2013
May 2013
April 2013
March 2013
February 2013
January 2013
December 2012
November 2012
October 2012
September 2012
August 2012
July 2012
June 2012
May 2012
April 2012
March 2012
February 2012
January 2012
December 2011
November 2011
October 2011
September 2011
August 2011
July 2011
June 2011
May 2011
April 2011
March 2011
February 2011
January 2011
December 2010
November 2010
October 2010
September 2010
August 2010
July 2010
June 2010
May 2010
April 2010
March 2010
February 2010
January 2010
December 2009
November 2009
October 2009
September 2009
August 2009
July 2009
June 2009
May 2009
April 2009
March 2009
February 2009
January 2009
December 2008
November 2008
October 2008
September 2008
August 2008
July 2008
June 2008
May 2008
April 2008
March 2008
February 2008
January 2008
December 2007
November 2007
October 2007
September 2007
August 2007
July 2007
June 2007
May 2007
April 2007
March 2007
February 2007
January 2007
2006
2005
2004
2003


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

For help and support help@jisc.ac.uk

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager