Brian,
One more quick question - I used run_first_all, so presumably the volumes
are already boundary corrected. However, I'm unsure as to whether the
boundary correction is applied in the .vtk files, or the
output_all_first.nii file, or both.
Thanks!
Allison
On Tue, 27 May 2008 15:01:23 +0100, Brian Patenaude <[log in to unmask]>
wrote:
>Hi,
>
>1) fslstats will calculate the volumes in whatever space the image is
>in. FIRST segments in the native space.
>The volumetric output is a 4D file, where each time point is a
>different structure. You can separate out the desired structure using
>fslroi or fslsplit. You'll then want to perform the boundary
>correction on that image.
|