Hi,
Please try the following web based tool
to get a list of the water networks
in a given PDB file.
http://iris.physics.iisc.ernet.in/psap/
Please click on the option "Display water Bridges".
regards,
Sekar
> Dear all,
>
> I am looking for some software (computer program) that would take a full
> PDB file (including waters) and that would output a list of the water
> networks (including the names of the atoms) at the surface of a protein.
>
> Thank you in advance,
>
> Fred.
>
> --
> This message has been scanned for viruses and
> dangerous content by MailScanner, and is
> believed to be clean.
>
>
> --
> This message has been scanned for viruses and
> dangerous content by MailScanner, and is
> believed to be clean.
>
>
Could you kindly confirm the safe
receipt of this mail please
All best wishes and regards,
Yours sincerely,
Sekar, K. Ph.D.
Bioinformatics Centre
(Centre of Excellance in Structural Biology and Bio-computing)
Supercomputer Education and Research Centre
Indian Insitute of Science
Bangalore 560 012
INDIA
E-mail: [log in to unmask] and
[log in to unmask]
Tel: 91-(0)80-23601409, 22933059, 22932469
Fax: 91-(0)80-23600683, 23600551
Homepage: http://www.physics.iisc.ernet.in/~dichome/sekhome/index.html
--
This message has been scanned for viruses and
dangerous content by MailScanner, and is
believed to be clean.
--
This message has been scanned for viruses and
dangerous content by MailScanner, and is
believed to be clean.
|