Hi,
It looks like you may be missing out the tmin and tsize co-
ordinates for the -roi option ( for a 3d volume just set these to 0
and 1 respectively )
e.g
fslmaths JHU_bilatATR5% -roi 0 182 112 218 0 182 0 1 JHU_bilatATR5%
_maths
> I am trying to figure out the proper syntax for the -roi option in
> fslmaths.
> I tried:
>
> fslmaths JHU_bilatATR5% -roi 0 182 112 218 0 182 JHU_bilatATR5%_maths
>
> but got a segmentation fault.
>
> Then I tried:
>
> fslmaths JHU_bilatATR5% -roi < 0 > < 182 > < 112 > <218 > < 0 > <
> 182 > JHU_bilatATR5%_maths
>
> and got an error message: "Missing name for redirect."
>
> Sorry to ask this silly question, but it's not very straightforward
> from the documentation available how these commands should be written.
>
> Stefano Marenco, NIMH
>
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