We would like to use a particular value of anisotropy to constrain
fibertracking. The parameter description to use this option from the
command line is "-f". Would the minimum value of anisotropy follow this
command or is there a more specific option to specifcy the value?
Specifically, what would this look like on the command line?
Thanks in advance for your help.
Antonina Savostyanova
GCAP, CBDB, NIMH
> The explaination on http://www.fmrib.ox.ac.uk/fsl/fdt/
> fdt_probtrackx.html reads:
> Use anisotropy to constrain tracking: Use this option if you want
> the fractional anisotropic volumes (stored in merged_f<i>samples)
> to influence the tractography.
> The tracts stop if the anisotropy is lower than a random variable
> between 0 (low anisotropy) and 1 (high anisotropy).
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