You can use slicer to output any specific slice in any orientation, or all
of the slices, but it requires some shell scripting.
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of Ted Yanagihara
Sent: Friday, April 11, 2008 10:52 AM
To: [log in to unmask]
Subject: Re: [FSL] Output pictures
There is probably a smart way to do this, but I use fslswapdim to
trick slicer into thinking a different plane is axial.
ted
On Apr 11, 2008, at 10:47 AM, carlos silva pereira wrote:
> Hi,
>
> By performing Renderhighres to a Feat directory you obtain a
> picture with several axial slices, which is nice to look at.
> Is there a way of getting a similar picture in sagittal and coronal
> orientation?
>
> I've been looking at the user guide and discovered Slicer but it
> works for axial only, and Slices outputs only 3 slices in each
> orientation...
>
> Thank you in advance!
> Carlos
>
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