Dear all,
I had the following error when I wanted to restart my project (below). I
searched the resonance associated with the serial=1082 and I commented out
all but one "covalentlyBound _IDREF" statements for this resonance in the
Nmr.xml file. It now works, however, I wanted to know if this is the right
way of fixing my problem and if my manipulation could cause further problems.
In particular, I am concerned by the IDREF that are now commented out.
Should I, for example, check the residues associated with these numbers?
Thanks,
Marc
POP-UP:
-------
Project invalid, please quit, fix and
re-start:ccp.nmr.Nmr.Resonace.setCovalentlyBound:value cannot be None:
CONSOLE:
-------
Error dereferencing covalentlyBound for object ccp.nmr.Nmr.Resonance with
(partial) key :
['PROT', 1082]
last xml element read:
</_StorageUnit>
parser state was:
setting links and multiattributes
ERROR loading xml ccp.nmr.Nmr ccp/nmr/Nmr.xml
Exception in Tkinter callback
Traceback (most recent call last):
File "/prog/ccpnmr/python2.4/lib/python2.4/lib-tk/Tkinter.py", line 1345,
in __call__
return self.func(*args)
File "/prog/ccpnmr/ccpnmr1.0/python/memops/gui/BasePopup.py", line 227, in ok
if (not self.apply()):
File "/prog/ccpnmr/ccpnmr1.0/python/memops/editor/OpenProjectPopup.py",
line 142, in apply
self.callback(self.project)
File "/prog/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/AnalysisPopup.py",
line 929, in initProject
Analysis.initProject(self, project)
File "/prog/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analysis.py", line
405, in initProject
self.initTopObjects(project)
File "/prog/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analysis.py", line
195, in initTopObjects
if not project.currentNmrProject:
File "/prog/ccpnmr/ccpnmr1.0/python/memops/api/Implementation.py", line
18782, in getCurrentNmrProject
result = self.findFirstNmrProject()
File "/prog/ccpnmr/ccpnmr1.0/python/memops/api/Implementation.py", line
13173, in findFirstNmrProject
otherStorage.load()
File "/prog/ccpnmr/ccpnmr1.0/python/memops/api/Implementation.py", line
9066, in load
ioModule.load(stream, self.project)
File "/prog/ccpnmr/ccpnmr1.0/python/ccp/xml/nmr/Nmr.py", line 114, in load
return GeneralXmlIO.load(stream, mapping, parentObject)
File "/prog/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlIO.py", line 425,
in load
result = doLoad(stream, mapping, headObject)
File "/prog/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlIO.py", line 614,
in doLoad
loadDelayedData(objectDict, delayedLoadData)
File "/prog/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlIO.py", line
1042, in loadDelayedData
setattr(obj,name,targets)
File "/prog/ccpnmr/ccpnmr1.0/python/ccp/api/nmr/Nmr.py", line 91845, in
setCovalentlyBound
raise ApiError("%s.setCovalentlyBound:" % self.qualifiedName +
ApiError: ccp.nmr.Nmr.Resonance.setCovalentlyBound:value cannot be None:
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