Hi,
Have you looked through the FSL FAQ?
Also look at the FSL course lectures and practicals.
We recommend 6 (or 7) DOF for functional to structural and
12 DOF for structural to standard. You should also remove non-brain
structures with BET.
All the best,
Mark
On 22 Mar 2008, at 17:21, Vina Goghari wrote:
> Dear FSL Users,
> I have been having trouble registering my functional, structural,
> and standard brain data to each other. I have used 12 DOF, but it
> seems like the registration is inverted. Any suggestions or can I
> send you some images to look at?
>
> Thanks,
> Vina Goghari
>
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