Hi - most likely you aren't running siena_flow2std _inside_ the SIENA
output directory called IMAGE1_to_IMAGE2_siena ?
Cheers.
On 21 Feb 2008, at 17:22, Matthew Kempton wrote:
> Dear FSL developers,
>
> I like the new version of SIENA in FSL 4 especially the html report.
> However I think there may possibly be a problem with the
> siena_flow2std
> program in FSL 4.
>
> The main SIENA program works fine but when I try running
> "siena_flow2std
> IMAGE1 IMAGE2" after SIENA I get the following error
>
> ** ERROR (nifti_image_read): failed to find header file
> for 'IMAGE1_to_IMAGE2_flow'
> a long list of errors follow mainly relating to not finding files
>
> Could it be because the siena_flow2std program is attemping to use the
> older FSL3 convention of filenames rather than the FSL 4 convention
> of 'renaming' the files as A and B and placing them in a new
> directory.
>
> Is that correct or am I just pressing the wrong buttons?
>
> Thanks
>
> Matthew Kempton
> Institute of Psychaitry
> London
>
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