Hi Matt,
What is the best way to find the actual center?
Thanks,
Vina
Matt Glasser wrote:
>You should ensure that the center coordinate (given by the -c <x> <y> <z>
>argument) is correctly located. You can load the image in FSLView and find
>the voxel coordinates that reflect the actual center of the brain. The
>default center will be the voxel coordinates that are loaded by default in
>FSLView.
>
>Peace,
>
>Matt.
>
>-----Original Message-----
>From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
>Of Vina Goghari
>Sent: Tuesday, February 19, 2008 7:54 PM
>To: [log in to unmask]
>Subject: [FSL] BET
>
>Hi,
>I have some extra brainstem that I would like to remove using FSL and am
>not have much luck changing the -f and -g values from the default to do
>it. Any suggestions for that?
>
>Thanks,
>Vina Goghari
>
>
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