Hi Paul,
your results are indeed in radiological convention. I
simply presented mine in the neurological one as some
people objected that it might be clearer if the left
arcuate fasciculus and Broca's area were located on
the left of the image.
Cheers,
Gwenaelle
--- Paul Geha <[log in to unmask]> a écrit :
> Dear FSL users,
>
>
> I am confused about the FSL vbm results orientation.
> If I use fslorient -getorient it tells me
> that the tstat map orientation is radiological. I
> cannot see anything in fslview however about
> orientation whenever I overlay the image on the
> avg152 brain. The x coordinate is always >0.
>
> The paper by Douaud et al. on schizophrenia in brain
> shows the results in the neurological
> convention (figure 1 and 3). Can you please help?
> Sorry if I missed any discussion on the list
> about that but I could not find an answer by looking
> into the archives.
>
> thanks a lot,
>
> Paul
>
>
> Paul Geha M.D.
> Northwestern University
> The Feinberg School of Medicine
> Department of Physiology M211
> 303 E. Chicago Ave.
> Chicago, IL 60611
> Tel:312-503 2886
> Fax: 312-503-5101
>
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