For what purpose do you want to skull strip additional DTI volumes? For any
DTI analysis the nodif_brain_mask is used to mask all of the images so that
DTI calculations are only done inside the brain.
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of Anastasia Ford
Sent: Tuesday, February 26, 2008 2:01 PM
To: [log in to unmask]
Subject: [FSL] BET question
Hello,
When I run BET on my 33 dir diffusion volume the resulting skull-stripped
image only has one volume. Is there a function which allows to strip all 33
volumes, or should I try to use BET on each volume manually?
Sincerely,
Anastasia
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