These don't look like error messages from Updates 1111. Have the updates been
installed properly? Updates 1111 should contain version 935 of the Makefile,
which should know how to handle Linux-i686. Also, in Updates 1111, the
version of spm_select.m should be 941, and this file uses "isfinite" rather
than "finite", so the warning you report should not have occurred.
Best regards,
-John
On Wednesday 30 January 2008 14:56, Luke Stoeckel wrote:
> I was presented with the errors below when installing SPM5 and Updates_1111
> on a new machine running Matlab 7.5 in Red Hat Linux Version 5. These
> errors occurred after using the DICOM Import feature. I tried recompiling
> the mex files, but received this message: Makefile:78: *** Unknowm platform
> Linux-i686. Stop.
>
> Any suggestions are appreciated.
>
> The Matlab error message:
>
> Warning: FINITE is obsolete and will be removed in future versions. Use
> ISFINITE instead.
>
> > In spm_select>selector at 113
>
> In spm_select at 97
> In spm_jobman>file_select at 875
> In spm_jobman>run_in_current_node1 at 698
> In spm_jobman>run_in_current_node1 at 706
> In spm_jobman>start_node1 at 668
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node at 630
> In spm_jobman>run_in_current_node at 608
> In spm_jobman>click_options_box at 594
> Warning: FINITE is obsolete and will be removed in future versions. Use
> ISFINITE instead.
>
> > In spm_select>click_file_box at 661
>
> In spm_select>selector at 429
> In spm_select at 97
> In spm_jobman>file_select at 875
> In spm_jobman>run_in_current_node1 at 698
> In spm_jobman>run_in_current_node1 at 706
> In spm_jobman>start_node1 at 668
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node at 630
> In spm_jobman>run_in_current_node at 608
> In spm_jobman>click_options_box at 594
> Warning: FINITE is obsolete and will be removed in future versions. Use
> ISFINITE instead.
>
> > In spm_select>click_file_box at 671
>
> In spm_select>selector at 429
> In spm_select at 97
> In spm_jobman>file_select at 875
> In spm_jobman>run_in_current_node1 at 698
> In spm_jobman>run_in_current_node1 at 706
> In spm_jobman>start_node1 at 668
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node at 630
> In spm_jobman>run_in_current_node at 608
> In spm_jobman>click_options_box at 594
> Warning: FINITE is obsolete and will be removed in future versions. Use
> ISFINITE instead.
>
> > In spm_select>selector at 113
>
> In spm_select at 97
> In spm_jobman>file_select at 875
> In spm_jobman>run_in_current_node1 at 698
> In spm_jobman>run_in_current_node1 at 706
> In spm_jobman>start_node1 at 668
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node at 630
> In spm_jobman>run_in_current_node at 608
> In spm_jobman>click_options_box at 594
> Warning: FINITE is obsolete and will be removed in future versions. Use
> ISFINITE instead.
>
> > In spm_select>select_rec at 1242
>
> In spm_select>selector at 429
> In spm_select at 97
> In spm_jobman>file_select at 875
> In spm_jobman>run_in_current_node1 at 698
> In spm_jobman>run_in_current_node1 at 706
> In spm_jobman>start_node1 at 668
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node1 at 674
> In spm_jobman>start_node at 630
> In spm_jobman>run_in_current_node at 608
> In spm_jobman>click_options_box at 594
> --------------------------
> Running "DICOM Import"
> Changing directory to:
> /home/RWeller/Desktop/R21_raw/ER/Session_1/Raw/ER01_1/ Warning: Unknown VR
> [32 10] in
> "/home/RWeller/Desktop/R21_raw/ER/Session_1/Raw/ER01_1//MR.1.3.46.670589.11
>.10123.5.0.3848.2008011816411185310.dcm" (offset=4861).
>
> > In spm_dicom_headers>read_dicom at 182
>
> In spm_dicom_headers>readdicomfile at 66
> In spm_dicom_headers at 25
> In spm_config_dicom>convert_dicom at 95
> In spm_jobman>run_struct1 at 1474
> In spm_jobman>run_struct1 at 1482
> In spm_jobman>run_struct1 at 1482
> In spm_jobman>run_struct at 1436
> Warning: Unknown VR [0 65533] in
> "/home/RWeller/Desktop/R21_raw/ER/Session_1/Raw/ER01_1//MR.1.3.46.670589.11
>.10123.5.0.3848.2008011816411185310.dcm" (offset=4873).
>
> > In spm_dicom_headers>read_dicom at 182
>
> In spm_dicom_headers>readdicomfile at 66
> In spm_dicom_headers at 25
> In spm_config_dicom>convert_dicom at 95
> In spm_jobman>run_struct1 at 1474
> In spm_jobman>run_struct1 at 1482
> In spm_jobman>run_struct1 at 1482
> In spm_jobman>run_struct at 1436
> Warning: Don't know how to handle VR of '\0\0'
>
> > In spm_dicom_headers>read_tag at 309
>
> In spm_dicom_headers>read_dicom at 192
> In spm_dicom_headers>readdicomfile at 66
> In spm_dicom_headers at 25
> In spm_config_dicom>convert_dicom at 95
> In spm_jobman>run_struct1 at 1474
> In spm_jobman>run_struct1 at 1482
> In spm_jobman>run_struct1 at 1482
> In spm_jobman>run_struct at 1436
> Error running job:
> Reference to non-existent field 'length'.
> --------------------------
> Done.
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