Yes - just use the easythresh command, something like:
easythresh <yourstats> <yourmask> <zthreshold> <clusterthreshold>
<backgroundimage> <output>
It will generate cluster tables, thresholded image and rendered image
for you.
Best,
Stephane
Brittany Copp wrote:
> I was wondering if there was any way of applying a cluster threshold to the
> uncorrected t-stat image outputted by FSL. Thanks
>
> Brittany
>
>
>
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