Hi Dave!
> As for the duplicate executions I can only assume this is due to the
> duplicate CLI invocations:
>
>> bedpostx /mnt/hgfs/Windows/VISIONCHIM/DTI/${subject}/bedpostx -n 2
>> - w 1 -b 1000
>> /usr/local/fsl/bin/bedpostx /mnt/hgfs/Windows/VISIONCHIM/DTI/$
>> {subject}/bedpostx -n 2 -w 1 -b 1000
Yes!! I saw it yesterday also and removed it already! It explains
perfectly the starge behaviour. Everythin is fine now!
> If the execution was truly of these two lines then you'd get two back-
> to-back runs. Was this output from the fdt GUI?
Unortunately yes, this is the gui output! I've just controlled it
again! (FSL 4.0.1).
Thanks a lot and my best wishes for holydays!
Markus
>
> Given the diagnostic info you've given me. I recommend you upgrade all
> your FSL installations to 4.0.2 so you get reliable feedback. For each
> run on a given subject remove, or move, any previous output directory
> out of the way. Run your example command under these circumstances to
> check that all is well.
>
> --
> Cheers, Dave
>
> Dave Flitney, IT Manager
> Oxford Centre for Functional MRI of the Brain
> E:[log in to unmask] W:+44-1865-222713 F:+44-1865-222717
> URL: http://www.fmrib.ox.ac.uk/~flitney
--
Dr. med. Markus Gschwind, M.D.
Laboratory for Neurology and Imaging of Cognition
Dept of Neurosciences
University Medical Center (CMU)
1 Michel-Servet - 1211 GENEVA - CH
Tel 0041 (0) 22 379 5324
Fax 0041 (0) 22 379 5402
email: [log in to unmask]
http://labnic.unige.ch
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